Curriculum Overview
The PhD in Bioinformatics program at Temple offers a flexible curriculum to accommodate a diversity of research backgrounds and interests. We offer a common set of core courses, primarily taken during the first two years. By focusing on coursework early, students will be able concentrate on an intensive research experience during their remaining 2-3 years.
Four bioinformatics tracks have been developed in order to reflect the strengths of Temple faculty and the breadth of the field of bioinformatics. Students will take four “common core” courses, two “specialized” courses in their chosen track, and at least two elective courses. Depending on an individual’s background, a student may be exempted from certain core courses, with the respective credits to be fulfilled from appropriate electives.
Note: We expect that there will be curriculum changes, particularly in the first year, as the program evolves.
Core Courses |
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BIOL 8250: Special Topic in Bioinformatics |
BIOL 9995: Topics in Bioinformatics (new team taught course) |
CIS 5015: Scripting for Science and Business |
BIOL 5403: Genomics |
BIOL 5312: Biostatistics |
Evolutionary Genomics |
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Specialized Courses |
BIOL 5509: Computational Genomics |
BIOL 9995: Population Genetics |
Electives |
BIOL 5112: Fundamentals of Genomic Evolutionary Medicine |
BIOL 5128: Genomics and Infectious Disease Dynamics |
BIOL 5241: Genomics and Evolutionary Biology of Parasites and Other Dependent Species | In addition to the listed electives, there are many others that may be suitable for an individual student, subject to the approval of their committee. |
Genomic Medicine |
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Specialized Courses |
BIOL 5509: Computational Genomics |
BIOL 5112: Fundamentals of Genomic Evolutionary Medicine |
Electives |
BIOL 5128: Genomics and Infectious Disease Dynamics |
BIOL 5241: Genomics and Evolutionary Biology of Parasites and Other Dependent Species | In addition to the listed electives, there are many others that may be suitable for an individual student, subject to the approval of their committee. |
Structural Bioinformatics |
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Specialized Courses |
BIOL 5411: Structural Bioinformatics I |
CHEM 5412: Structural Bioinformatics II |
Electives |
CHEM 5302: Statistical Thermodynamics |
BIOL 5509: Computational Genomics |
BIOL 5112: Fundamentals of Genomic Evolutionary Medicine |
CHEM 5102: Data Analysis and Evidence | In addition to the listed electives, there are many others that may be suitable for an individual student, subject to the approval of their committee. |
Biological Data Analysis |
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Specialized Courses |
CIS 5523: Knowledge Discovery and Data Mining |
BIOL 5466: Quantitative Science to Solve Global Problems |
Electives |
CIS 5526: Machine Learning |
CIS 5002: Database Design & Programming |
CIS 5011: Programming and Data Structure |
CIS 5516: Principles of Data Management | In addition to the listed electives, there are many others that may be suitable for an individual student, subject to the approval of their committee. |